Díaz-Pérez A, López-Álvarez D, Sancho R, Catalán P.:
Reconstructing the origins and the biogeography of species¿ genomes in the highly reticulate allopolyploid-rich model grass genus Brachypodium using minimum evolution, coalescence and maximum likelihood approaches. Molecular phylogenetics and evolution. Vol. 127: 256-271. 2018. https://doi.org/10.1016/j.ympev.2018.06.003
Sancho R, Cantalapiedra C, López-Alvarez D, Gordon S, Vogel J, Catalan P & Contreras-Moreira B.:
Comparative plastome genomics and phylogenomics of Brachypodium: flowering time signatures, introgression and recombination in recently diverged ecotypes. New Phytologist. 2018. https://doi.org/10.1111/nph.14926
Orozco-Arias S, Núñez-Rincón A.M, Tabares-Soto R, López-Álvarez D.:
Worldwide co-occurrence analysis of 17 species of the genus Brachypodium using data mining. PeerJ 6:e6193. 2019. https://doi.org/10.7717/peerj.6193
Ceballos D, López-Álvarez D, Isaza G, Tabares-Soto R, Orozco-Arias S, Ferrin C.:
A Machine Learning-based Pipeline for the Classification of CTX-M in Metagenomics Samples. Processes, 7(4), 235. 2019. https://doi.org/10.3390/pr7040235
Pardo J.M, López-Alvarez, D, Ceballos G, Alvarez E, Cuellar W.J.:
Detection of Ralstonia solanacearum phylotype II, race 2 causing Moko disease and validation of resistance observed in the hybrid plantain FHIA-21. Tropical Plant Pathology. 2019. https://doi.org/10.1007/s40858-019-00282-3
Alvarez-Yela A.C, Mosquera-Rendón J, Noreña A, Cristancho-Ardila M.A, López-Alvarez, D.:
Microbial diversity exploration of marine hosts at Serrana Bank, a coral atoll of the Seaflower Biosphere Reserve. Frontiers in Marine Science. 2019. https://doi.org/10.3389/fmars.2019.00338
Arenas, A., López, D., Alvarez, E., Llano, G., Loke, J.B.:
. Ecological Approaches effects evaluation in Ralstonia solanacearum Smith population, causal agent of platano moko. Fitopatologia Colombiana. Vol. 28 (2):76-80. ISSN: 0120-0143 . 2005 https://hdl.handle.net/10568/44289
Rivera-Jiménez, H.J., Álvarez-Soto, A., Palacio-Mejía., J.D., Barrios-Leal, D.Y & López-Álvarez, D.:
Diversidad genética intra e inter-específica de ñame Dioscorea spp. de la región Caribe de Colombia mediante marcadores AFLP. Acta Agronómica 60(4): 328-338. ISSN: 0120-2812 (Print); 2323-0118 (Online). 2011. https://www.redalyc.org/articulo.oa?id=169922450005
Catalán,P., Müller, J., Hasterok, R., Jenkins, G., Mur, L.A.J., Langdon, T., Betekhtin, A., Siwinska, D., Pimentel, M & López-Alvarez, D.:
Evolution and taxonomic split of the model grass Brachypodium distachyon. Annals of Botany 109(2): 385¿405. 2012. https://doi.org/10.1093/aob/mcr294
López-Álvarez, D., López-Herranz., M.L, Betekhtin, A & Catalán, P.:
. A DNA Barcoding method to discriminate between the model plant Brachypodium distachyon and its close relatives B. stacei and B. hybridum (Poaceae). PLoS ONE 7(12): e51058. 2012 https://doi.org/10.1371/journal.pone.0051058
Trujillo-Arias, N., Amorocho, D. A., López-Álvarez, D., Mejía-Ladino, L. M.:
Phylogeographic relations of some feeding and nesting of hawksbill turtle rookeries (Eretmochelys imbricata) in the Caribbean and Pacific of Colombia. Boletín de Investigaciones Marinas y Costeras, 43(1):159-182. ISSN: . 2014.
Enrique Arbeláez-Cortés, María Fernanda Torres, Diana López-Álvarez, Juan Diego Palacio-Mejía, Ángela María Mendoza, Claudia Alejandra Medina.:
Colombian frozen biodiversity: 16 years of the tissue¿s collection of the Humboldt Institute. Acta Biológica Colombiana. Vol. 20 (2):163-173. 2015. https://doi.org/10.15446/abc.v20n2.47102
López-Alvarez, D., Manzaneda, A., Rey, P., Giraldo, P., Benavente, E., Allainguillaume, J., Mur, L., Caicedo, A., Hazen, S., Breiman, S., Ezrati, S & Catalán, P.:
Environmental niche variation and evolutionary diversification of the Brachypodium distachyon grass complex species in their native circum-Mediterranean range. American Journal of Botany 102(7):1-16. 2015. https://doi.org/10.3732/ajb.1500128
Catalán P, López-Álvarez D, Bellosta C & L. Villar.:
Updated taxonomic descriptions, iconography and habitat preferences of the model grasses Brachypodium distachyon, B. stacei and B. hybridum. Anales del Real Jardín Botánico de Madrid 73(1): e028. 2016. http://dx.doi.org/10.3989/ajbm.2428
Mendoza ÁM, Torres MF, Paz A, Trujillo-Arias N, López-Alvarez D, Sierra S, Forero F, Gonzalez MA.:
Cryptic diversity revealed by DNA barcoding in Colombian illegally traded bird species. Molecular Ecology Resources. Jul;16(4):862-73. 2016. https://doi.org/10.1111/1755-0998.12515
López-Álvarez D, Zubair H, Beckmann M, Draper J, Catalan P.:
Diversity and association of phenotypic and metabolomic traits in the close model grasses Brachypodium distachyon, B. stacei and B. hybridum. Annals of Botany 119(4). 2017. https://doi.org/10.1093/aob/mcw239
Marques I, Shiposha V, López-Alvarez D, Manzaneda A.J, Hernandez P, Olonova M & Catalán P.:
Environmental isolation explains Iberian genetic diversity in the highly homozygous model grass Brachypodium distachyon. BMC Evolutionary Biology 17:139. 2017. https://doi.org/10.1186/s12862-017-0996-x
Lusinska, J.; Betekhtin, A.; Lopez-Alvarez, D.; Catalan, P.; Jenkins, G.; Wolny, E.; Hasterok, R.:
Comparatively Barcoded Chromosomes of Brachypodium Perennials Tell the Story of Their Karyotype Structure and Evolution. International Journal Molecular Sciences 20, 5557. 2019. https://doi.org/10.3390/ijms20225557
Shiposha V, Marques I, López-Alvarez D, Manzaneda AJ, Hernandez P, Olonova M, Catalán P.:
Multiple founder events explain the genetic diversity and structure of the model allopolyploid grass Brachypodium hybridum in the Iberian Peninsula hotspot. Annals of Botany. 2019. http://dx.doi.org/10.1093/aob/mcz169
Leiva, A. M., Siriwan, W., López-Alvarez, D., Barrantes, I., Hemniam, N., Saokham, K., & Cuellar, W. J.:
Nanopore-Based Complete Genome Sequence of a Sri Lankan Cassava Mosaic Virus (Geminivirus) Strain from Thailand. Microbiology resource announcements, 9(6), e01274-19. 2020. https://doi.org/10.1128/MRA.01274-19
Siriwan W, Jimenez J, Hemniam N, Saokham K, López-Alvarez D, Leiva A, Martinez A, Mwanzia L, Becerra L-A, & Cuellar, W. J.:
Surveillance and Diagnostics of the emergent Sri Lankan cassava mosaic virus (Geminiviridae) in Southeast Asia. Virus research. 11;285:197959. 2020. https://doi.org/10.1016/j.virusres.2020.197959
López-Alvarez D, Leiva AM, Barrantes I, Pardo JM, Dominguez V, Cuellar WJ.:
Complete genome sequence of the plant pathogen Ralstonia solanacearum strain CIAT-078, isolated in Colombia, obtained using Oxford Nanopore Technology. Microbiology Resource Announcements 9:e00448-20. 2020. https://doi.org/10.1128/MRA.00448-20
López-Alvarez D, Parra B, Cuellar WJ.:
Genome sequence of SARS-CoV-2 isolate Cali-01, from Colombia, obtained using Oxford Nanopore MinION sequencing. Microbiology Resource Announcements 9:e00573-20. 2020. https://doi.org/10.1128/MRA.00573-20
López-Alvarez D, Parra B, Cuellar WJ.:
Genome sequence of SARS-CoV-2 isolate Cali-01, from Colombia, obtained using Oxford Nanopore MinION sequencing. Microbiology Resource Announcements 9:e00573-20. 2020. https://doi.org/10.1128/MRA.00573-20
Cardona K.M., López-Alvarez D. C., Álvarez L. A.:
Genome-wide association studies in sheep from Latin America. Review. Revista Mexicana de Ciencias Pecuarias. Vol. 11, Núm. 3: Julio-Septiembre. 2020. https://doi.org/10.22319/rmcp.v11i3.5372
Revelo, H.A.; López-Alvarez, D.; Landi, V.; Rizzo, L.; Alvarez, L.A.:
Mitochondrial DNA Variations in Colombian Creole Sheep Confirm an Iberian Origin and Shed Light on the Dynamics of Introduction Events of African Genotypes. Animals. 10, 1594. 2020. https://doi.org/10.3390/ani10091594
Franco, N.R.; Giraldo, M.Á.; López-Alvarez, D.; Gallo-Franco, J.J.; Dueñas, L.F.; Puentes, V.; Castillo,:
A. Bacterial Composition and Diversity in Deep-Sea Sediments from the Southern Colombian Caribbean Sea. Diversity 2020, 13, 10. https://doi.org/10.3390/d13010010
Fabio Castillo-Rivera, Alejandro Ondo-Méndez, Julien Guglielmi, Jean-Marie Guigonis, Lun Jing, Sabine Lindenthal, Andrea Gonzalez, Diana López, Béatrice Cambien, Thierry Pourcher.:
Tumor microenvironment affects exogenous sodium/iodide symporter expression. Translational Oncology 14 (1). 2021. https://doi.org/10.1016/j.tranon.2020.100937
Katherine Medina-Ortiz, Diana López-Alvarez, Felipe Navia, Thomas Hansen, Leonardo Fierro & Santiago Castaño.:
Identification of Na+/K+-ATPase ¿/¿ isoforms in Rhinella marina tissues by RNAseq and a molecular docking approach at the protein level to evaluate ¿ isoform affinities for bufadienolides. Comparative Biochemistry and Physiology, vol 254. 2021. https://doi.org/10.1016/j.cbpa.2021.110906
Chittarath K, Jimenez J, Vongphachanh P, Leiva AM, Sengsay S, López-Alvarez D, Bounvilayvong T, Lourido D, Vorlachith V, Cuellar WJ.:
First report of Sri Lankan cassava mosaic virus and Cassava Mosaic Disease in Laos. Plant Disease. 2021. https://doi.org/10.1094/PDIS-09-20-1868-PDN
Edilma Vélez-Sinisterra,Diana López-Alvarez, Carlos A.Jaramillo Cruz, Jaime E.Muñoz Florez.:
DNA barcoding of Brycon henni (Characiformes: Characidae) in the Yotoco, Sonso, Guabas and Sabaletas rivers of Colombia. AACL Bioflux, 14,4:2211-2228. 2021. https://www.bioflux.com.ro/docs/2021.2211-2228.pdf
Revelo, H.A.; Landi, V.; López¿Alvarez, D.; Palacios, Y.A.; Paiva, S.R.; McManus, C.; Ciani, E.; Alvarez, L.Á.:
New Insight into the Genome¿Wide Diversity and Admixture of Six Colombian Sheep Populations. Genes, 13, 1415. 2022. https://doi.org/10.3390/genes13081415
Leiva AM, Rouard M, Lopez-Alvarez D, Cenci A, Breton C, Acuña R, Rojas JC, Dita M, Cuellar WJ.:
Draft Genome Sequence of Fusarium oxysporum f. sp. cubense Tropical Race 4 from Peru, Obtained by Nanopore and Illumina Hybrid Assembly. Microbiol Resour Announc. 15;11(9):e0034722. 2022. https://doi.org/10.1128/mra.00347-22 Epub 2022 Aug 8. PMID: 35938819; PMCID: PMC9476995.
Leiva, A.M.; Chittarath, K.; Lopez-Alvarez, D.; Vongphachanh, P.; Gomez, M.I.; Sengsay, S.; Wang, X.-W.; Rodriguez, R.; Newby, J.; Cuellar, W.J.:
Mitochondrial Genetic Diversity of Bemisia tabaci (Gennadius) (Hemiptera: Aleyrodidae) Associated with Cassava in Lao PDR. Insects 2022, 13, 861. https://doi.org/10.3390/insects13100861
Reyes-Herrera PH, Torres-Bedoya E, Lopez-Alvarez D, Burbano-David D, Carmona SL, Bebber DP, et al.:
Genome sequence data reveal at least two distinct incursions of the tropical race 4 (TR4) variant of Fusarium wilt into South America.
Phytopathology, 2022:2022.01.17.476647. https://doi.org/10.1094/PHYTO-01-22-0034-R
Valencia-Valencia DE, Lopez-Alvarez D, Rivera-Franco N, Castillo A, Piña JS, Pardo CA, Parra B.:
PredictION: a predictive model to establish the performance of Oxford sequencing reads of SARS-CoV-2. PeerJ 10:e14425. 2022. https://doi.org/10.7717/peerj.14425
Suarez-Mendez M, L, Ramirez- Cheyne J, Arango-Aguirre A, Rojas-Ceron C, A, López Alvarez D, Pachajoa-Londoño H, M::
EPILEPTIC ENCEPHALOPATHY WITH VARIANTS IN THE PHACTR1 AND AFF2 GENES: A CASE REPORT. Cytogenet Genome Res 2022. https://doi.org/10.1159/000528735
Rugeles-Silva, P.A.; Londoño, J.A.; Sánchez de Prager, M.; Muñoz Flórez, J.E.; López-Álvarez, D.:
Soil Bacterial Communities from Three Agricultural Production Systems in Rural Landscapes of Palmira, Colombia. Biology, 12, 701. 2023. https://doi.org/10.3390/biology12050701
Juan D. Duque-Zapata1, Jaime Eduardo Mu¿oz Florez, Diana López-Alvarez.:
Metagenomics approaches to understanding soil health in environmental research ¿ a review. SOIL SCIENCE ANNUAL, 74(1), 163080. 2023. https://doi.org/10.37501/soilsa/163080
Vélez-Martínez GA, Reyes-Ardila WL, Duque-Zapata JD, Rugeles-Silva PA, Muñoz Flórez JE, López-Álvarez D.:
Soil bacteria and fungi communities are shaped by elevation influences in Colombian forest and páramo natural ecosystems. Int Microbiol. 2023 Jul 17. https://doi.org/10.1007/s10123-023-00392-8
Bastidas-Bacca, M.A.; Dayve-Bacca-Descance, D.; Guerra-Acosta, A.d.S.; Perea-Morera, E.; Díaz-Ariza, L.A.; López-Álvarez, D.; Osorio-García, A.M.:
Ethnobotanical Insights: Qualitative Analysis of Medicinal Plants in Colón Putumayo for Traditional Knowledge Preservation. Plants 2023, 12, 3390. https://doi.org/10.3390/plants1219339
Revelo HA, López-Alvarez D, Palacios YA, Vergara OD, Yánez MB, Ariza MF, Molina SLC, Sanchez YO, Alvarez LÁ.:
Genome-wide association study reveals candidate genes for traits related to meat quality in Colombian Creole hair sheep. Trop Anim Health Prod. 2023 Oct 12;55(6):357. https://doi.org/10.1007/s11250-023-03688-z
Vélez-Martínez, G.A.; Duque-Zapata, J.D.; Reyes-Ardila, W.L.; Muñoz Flórez, J.E.; Díaz Gallo, S.A.; Díaz Ariza, L.A.; López-Álvarez, D.:
Comparative Analysis of Bacteria, Fungi, and Arbuscular Mycorrhizal Fungi in Medicinal Plants Lippia alba and Petiveria alliacea in Colombia. Diversity 2023, 15, 1167. https://doi.org/10.3390/d15121167
Ramírez-Cheyne, J., López, D., Payán, C., Arcos-Burgos, M., & Saldarriaga, W.:
Fragile X syndrome in the largest world clustering. I. Genetic epidemiology and founder effect outline. American Journal of Medical Genetics Part A, 1¿8. (2024). https://doi.org/10.1002/ajmg.a.63523
Reyes-Ardila, W.L.; Rugeles-Silva, P.A.; Duque-Zapata, J.D.; Vélez-Martínez, G.A.; Tarazona Pulido, L.; Cardona Tobar, K.M.; Díaz Gallo, S.A.; Muñoz Flórez, J.E.; Díaz-Ariza, L.A.; López-Alvarez, D.:
Exploring Genomics and Microbial Ecology: Analysis of Bidens pilosa L. Genetic Structure and Soil Microbiome Diversity by RAD-Seq and Metabarcoding. Plants 2024, 13, 221. https://doi.org/10.3390/plants13020221
Cardona KM, Rugeles-Silva PA, Tarazona-Pulido L, Díaz-Ariza LA, Muñoz Florez JE, López-Alvarez D.:
Exploring the potential of omics technologies in medicinal plant research: A review in Colombia Bol Latinoam Caribe Plant Med Aromat. 23 (4): 460 - 486 (2024). https://doi.org/10.37360/blacpma.24.23.4.32
