Moeller, A. H.; Caro-Quintero, A.; Mjungu, D.; Georgiev, A. V.; Lonsdorf, E. V.; Muller, M. N.; Ochman, H.:
Cospeciation of gut microbiota with hominids. Science, 2016, 353(6297), 380-382.
Rodriguez-Castano, G. P.; Caro-Quintero, A.; Reyes, A. ; Lizcano, F.:
Advances in Gut Microbiome research, opening new strategies to cope with a Western lifestyle. Frontiers in Genetics, (2016). 7, 224.
Díaz-Cárdenas, C.; Bernal, L. F. ; Caro-Quintero, A.; López, G.; Alzate, J. D.; Gonzalez, L. N.; .Baena, S.:
Draft genome and description of Consotaella salsifontis gen. nov. sp. nov., a halophilic, free-living, nitrogen-fixing alphaproteobacterium isolated from an ancient terrestrial saline spring. International Journal of Systematic and Evolutionary Microbiology,(2017), 67(10), 3744-3751.
Pacheco-Montealegre, M.; Patiño, R. E.; Torres, L.; Jiménez, S.; Rodríguez, J. L.; Caro-Quintero, A.:
The draft genome of Brucella abortus strain Ba col-B012, isolated from a dairy farm in Nariño, Colombia, bring new insights into the epidemiology of biovar 4 strains. Standards in genomic sciences, (2017) 12(1), 89.
Deng, J., Auchtung, J. M., Konstantinidis, K. T., Caro-Quintero, A., Brettar, I., Höfle, M., & Tiedje, J. M.:
Divergence in gene regulation contributes to sympatric speciation of Shewanella baltica strains. Appl. Environ. Microbiol., (2018) 84(4), e02015-17.
Ruiz-Moreno, H. A.; López-Tamayo, A. M.; Caro-Quintero, A.; Husserl, J., & Barrios, A. F. G.:
Metagenome level metabolic network reconstruction analysis reveals the microbiome in the Bogotá River is functionally close to the microbiome in produced water. Ecological modelling, 399, 1-12.
Rodriguez-Castaño, G. P.; Rey, F. E.; Caro-Quintero, A; Acosta-González, A.:
Gut-derived Flavonifractor species variants are differentially enriched during in vitro incubation with quercetin. PloS one (2020), 15(12), e0227724.
Hernández, R., Jimenez, H., Vargas-Garcia, C., Caro-Quintero, A., & Reyes, A.:
Disentangling the complexity of the rumen microbial diversity through fractionation using a sucrose density gradient. Frontiers in Microbiology, (2021) 1883.
Simbaqueba, J.; Rodríguez, E. A.; Burbano-David, D.; González, C.; Caro-Quintero, A.:
Putative novel effector genes revealed by the genomic analysis of the phytopathogenic fungus Fusarium oxysporum f. sp. physali (Foph) that infects cape gooseberry plants. Frontiers in microbiology, (2021). 11, 593915.
Santos-Torres, M.; Romero-Perdomo, F.; Mendoza-Labrador, J.; Gutiérrez, A. Y.; Vargas, C.; Castro-Rincon, E.; Caro-Quintero, A.; Estrada-Bonilla, G. A:
Genomic and phenotypic analysis of rock phosphate-solubilizing rhizobacteria. Rhizosphere, (2021) 17, 100290.
Hernández, R.; De Mares, M. C.; Jimenez, H.; Reyes, A.; Caro-Quintero, A.:
Functional and Phylogenetic Characterization of Bacteria in Bovine Rumen Using Fractionation of Ruminal Fluid. Frontiers in microbiology, 2022, 13.
Oh. S.; Caro-Quintero, A.; Tsementzi, D.; DeLeon-Rodriguez, N.; Luo, C.; Poretsky., R.; Konstantinidis, K.T.:
Metagenomic insights into the evolution, function, and complexity of the planktonic microbial community of Lake Lanier, a temperate freshwater ecosystem. Appl Environ Microbiol. 2011 Sep; 77(17): 6000-11
Caro-Quintero, A; Auchtung, J.; Deng, J.; Brettar, I.; Höfle, M.; Tiedje, J.M.; Konstantinidis, K.T.;:
Metagenomic insights into the evolution, function, and complexity of the planktonic microbial community of Lake Lanier, a temperate freshwater ecosystem. Appl Environ Microbiol. 2011 Sep; 77(17): 6000-11
Caro-Quintero, A.; Rodriguez-Castaño, G. P.; Konstantinidis, K.T.:
Genomic insights into the convergence and pathogenicity factors of Campylobacter jejuni and Campylobacter coli species. J Bacteriol. 2009 Sep;191(18):5824-31.
Caro-Quintero, A; Konstantinidis, K.T.:
Bacterial species may exist, metagenomics reveal. Environ Microbiol. 2012 Feb;14(2):347-55
Caro-Quintero, A ; Konstantinidis, K.T.:
Inter-phylum HGT has shaped the metabolism of many mesophilic and anaerobic bacteria. ISME J (2014).
Caro-Quintero, A., Ritalahti, K.M.; Cusick, K.D.; Löffler, F.E.; Konstantinidis, K.T.:
The chimeric genome of Sphaerochaeta: non-spiral spirochetes that break with the prevalent dogma in spirochete biology. mBio 3.3 (2012).
Ochman, H; A. Caro-Quintero:
Genome size and structure, bacterial. In Encyclopedia of Evolutionary Biology. Kliman, R.M. (ed). Oxford: Academic Press, pp. 179¿185.
Caro-Quintero, A; Deng. J; Auchtung, J; Brettar, I.; Höfle; M.G.; Klappenbach, J.; Konstantinidis, K.T.:
Unprecedented levels of horizontal gene transfer among spatially co-occurring Shewanella bacteria from the Baltic Sea. ISME J. 2011 Jan;5(1):131-40.